Substrate binding of a GH5 endoglucanase from the ruminal fungus Piromyces rhizinflata

Chih Wen Tseng, Tzu Ping Ko, Rey Ting Guo, Jian Wen Huang, Hao Ching Wang, Chun Hsiang Huang, Ya Shan Cheng, Andrew H J Wang, Je Ruei Liu

研究成果: 雜誌貢獻文章同行評審

21 引文 斯高帕斯(Scopus)

摘要

The endoglucanase EglA from Piromyces rhizinflata found in cattle stomach belongs to the GH5 family of glycoside hydrolases. The crystal structure of the catalytic domain of EglA shows the (β/α)8-barrel fold typical of GH5 enzymes. Adjacent to the active site of EglA, a loop containing a disulfide bond not found in other similar structures may participate in substrate binding. Because the active site was blocked by the N-terminal His tag of a neighbouring protein molecule in the crystal, enzyme-substrate complexes could not be obtained by soaking but were prepared by cocrystallization. The E154A mutant structure with a cellotriose bound to the -3, -2 and -1 subsites shows an extensive hydrogen-bonding network between the enzyme and the substrate, along with a stacking interaction between Trp44 and the -3 sugar. A possible dimer was observed in the crystal structure, but retention of activity in the E242A mutant suggested that the enzyme probably does not function as a dimer in solution. On the other hand, the first 100 amino acids encoded by the original cDNA fragment are very similar to those in the last third of the (β/α)8-barrel fold, indicating that EglA comprises at least two catalytic domains acting in tandem.
原文英語
頁(從 - 到)1189-1194
頁數6
期刊Acta Crystallographica Section F: Structural Biology and Crystallization Communications
67
發行號10
DOIs
出版狀態已發佈 - 十月 2011
對外發佈

ASJC Scopus subject areas

  • 生物化學
  • 生物物理學
  • 結構生物學
  • 遺傳學
  • 凝聚態物理學

指紋

深入研究「Substrate binding of a GH5 endoglucanase from the ruminal fungus Piromyces rhizinflata」主題。共同形成了獨特的指紋。

引用此