Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability

Jing Long Huang, Pei Song Gao, Rasika A. Mathias, Tsung Chieh Yao, Li Chen Chen, Ming Ling Kuo, Shih Chang Hsu, Beverly Plunkett, Alkis Togias, Kathleen C. Barnes, Cristiana Stellato, Terri H. Beaty, Shau Ku Huang

研究成果: 雜誌貢獻文章

85 引文 (Scopus)

摘要

The gene, CRTH2, encoding a receptor for prostaglandin D2 (PGD2), is located within the peak linkage region for asthma on chromosome (Chr) 11q reported in African American families. Family-based analysis of asthma and two common SNPs [G1544C and G1651A (rs545659)] in the 3′-untranslated region of CRTH2 showed significant evidence of linkage in the presence of disequilibrium for the 1651G allele (P = 0.003) of SNP rs545659. Haplotype analysis yielded additional evidence of linkage disequilibrium for the 1544G-1651G haplotype (P < 0.001). Population-based case-control analyses were conducted in two independent populations, and demonstrated significant association of the 1544G-1651G haplotype with asthma in an African American population (P = 0.004), and in a population of Chinese children (P < 0.001). Moreover, in the Chinese children the frequency of the 1651G allele in near-fatal asthmatics was significantly higher than mild-to-moderate asthmatics (P = 0.001) and normal controls (P < 0.001). The 1651G allele of SNP re545659 was also associated with a higher degree of bronchial hyperresponsiveness (P < 0.027). Transcriptional pulsing experiments showed that the 1544G-1651G haplotype confers a significantly higher level of reporter mRNA stability, when compared with a non-transmitted haplotype (1544C-1651A), suggesting that the CRTH2 gene on Chr. 11q is a strong candidate gene for asthma.

原文英語
頁(從 - 到)2691-2697
頁數7
期刊Human Molecular Genetics
13
發行號21
DOIs
出版狀態已發佈 - 十一月 1 2004
對外發佈Yes

指紋

Formyl Peptide Receptor
Th2 Cells
RNA Stability
Haplotypes
Asthma
Single Nucleotide Polymorphism
Genes
African Americans
Population
Chromosomes
Alleles
Linkage Disequilibrium
3' Untranslated Regions
Gene Frequency

ASJC Scopus subject areas

  • Genetics

引用此文

Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability. / Huang, Jing Long; Gao, Pei Song; Mathias, Rasika A.; Yao, Tsung Chieh; Chen, Li Chen; Kuo, Ming Ling; Hsu, Shih Chang; Plunkett, Beverly; Togias, Alkis; Barnes, Kathleen C.; Stellato, Cristiana; Beaty, Terri H.; Huang, Shau Ku.

於: Human Molecular Genetics, 卷 13, 編號 21, 01.11.2004, p. 2691-2697.

研究成果: 雜誌貢獻文章

Huang, JL, Gao, PS, Mathias, RA, Yao, TC, Chen, LC, Kuo, ML, Hsu, SC, Plunkett, B, Togias, A, Barnes, KC, Stellato, C, Beaty, TH & Huang, SK 2004, 'Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability', Human Molecular Genetics, 卷 13, 編號 21, 頁 2691-2697. https://doi.org/10.1093/hmg/ddh279
Huang, Jing Long ; Gao, Pei Song ; Mathias, Rasika A. ; Yao, Tsung Chieh ; Chen, Li Chen ; Kuo, Ming Ling ; Hsu, Shih Chang ; Plunkett, Beverly ; Togias, Alkis ; Barnes, Kathleen C. ; Stellato, Cristiana ; Beaty, Terri H. ; Huang, Shau Ku. / Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability. 於: Human Molecular Genetics. 2004 ; 卷 13, 編號 21. 頁 2691-2697.
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title = "Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability",
abstract = "The gene, CRTH2, encoding a receptor for prostaglandin D2 (PGD2), is located within the peak linkage region for asthma on chromosome (Chr) 11q reported in African American families. Family-based analysis of asthma and two common SNPs [G1544C and G1651A (rs545659)] in the 3′-untranslated region of CRTH2 showed significant evidence of linkage in the presence of disequilibrium for the 1651G allele (P = 0.003) of SNP rs545659. Haplotype analysis yielded additional evidence of linkage disequilibrium for the 1544G-1651G haplotype (P < 0.001). Population-based case-control analyses were conducted in two independent populations, and demonstrated significant association of the 1544G-1651G haplotype with asthma in an African American population (P = 0.004), and in a population of Chinese children (P < 0.001). Moreover, in the Chinese children the frequency of the 1651G allele in near-fatal asthmatics was significantly higher than mild-to-moderate asthmatics (P = 0.001) and normal controls (P < 0.001). The 1651G allele of SNP re545659 was also associated with a higher degree of bronchial hyperresponsiveness (P < 0.027). Transcriptional pulsing experiments showed that the 1544G-1651G haplotype confers a significantly higher level of reporter mRNA stability, when compared with a non-transmitted haplotype (1544C-1651A), suggesting that the CRTH2 gene on Chr. 11q is a strong candidate gene for asthma.",
author = "Huang, {Jing Long} and Gao, {Pei Song} and Mathias, {Rasika A.} and Yao, {Tsung Chieh} and Chen, {Li Chen} and Kuo, {Ming Ling} and Hsu, {Shih Chang} and Beverly Plunkett and Alkis Togias and Barnes, {Kathleen C.} and Cristiana Stellato and Beaty, {Terri H.} and Huang, {Shau Ku}",
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T1 - Sequence variants of the gene encoding chemoattractant receptor expressed on Th2 cells (CRTH2) are associated with asthma and differentially influence mRNA stability

AU - Huang, Jing Long

AU - Gao, Pei Song

AU - Mathias, Rasika A.

AU - Yao, Tsung Chieh

AU - Chen, Li Chen

AU - Kuo, Ming Ling

AU - Hsu, Shih Chang

AU - Plunkett, Beverly

AU - Togias, Alkis

AU - Barnes, Kathleen C.

AU - Stellato, Cristiana

AU - Beaty, Terri H.

AU - Huang, Shau Ku

PY - 2004/11/1

Y1 - 2004/11/1

N2 - The gene, CRTH2, encoding a receptor for prostaglandin D2 (PGD2), is located within the peak linkage region for asthma on chromosome (Chr) 11q reported in African American families. Family-based analysis of asthma and two common SNPs [G1544C and G1651A (rs545659)] in the 3′-untranslated region of CRTH2 showed significant evidence of linkage in the presence of disequilibrium for the 1651G allele (P = 0.003) of SNP rs545659. Haplotype analysis yielded additional evidence of linkage disequilibrium for the 1544G-1651G haplotype (P < 0.001). Population-based case-control analyses were conducted in two independent populations, and demonstrated significant association of the 1544G-1651G haplotype with asthma in an African American population (P = 0.004), and in a population of Chinese children (P < 0.001). Moreover, in the Chinese children the frequency of the 1651G allele in near-fatal asthmatics was significantly higher than mild-to-moderate asthmatics (P = 0.001) and normal controls (P < 0.001). The 1651G allele of SNP re545659 was also associated with a higher degree of bronchial hyperresponsiveness (P < 0.027). Transcriptional pulsing experiments showed that the 1544G-1651G haplotype confers a significantly higher level of reporter mRNA stability, when compared with a non-transmitted haplotype (1544C-1651A), suggesting that the CRTH2 gene on Chr. 11q is a strong candidate gene for asthma.

AB - The gene, CRTH2, encoding a receptor for prostaglandin D2 (PGD2), is located within the peak linkage region for asthma on chromosome (Chr) 11q reported in African American families. Family-based analysis of asthma and two common SNPs [G1544C and G1651A (rs545659)] in the 3′-untranslated region of CRTH2 showed significant evidence of linkage in the presence of disequilibrium for the 1651G allele (P = 0.003) of SNP rs545659. Haplotype analysis yielded additional evidence of linkage disequilibrium for the 1544G-1651G haplotype (P < 0.001). Population-based case-control analyses were conducted in two independent populations, and demonstrated significant association of the 1544G-1651G haplotype with asthma in an African American population (P = 0.004), and in a population of Chinese children (P < 0.001). Moreover, in the Chinese children the frequency of the 1651G allele in near-fatal asthmatics was significantly higher than mild-to-moderate asthmatics (P = 0.001) and normal controls (P < 0.001). The 1651G allele of SNP re545659 was also associated with a higher degree of bronchial hyperresponsiveness (P < 0.027). Transcriptional pulsing experiments showed that the 1544G-1651G haplotype confers a significantly higher level of reporter mRNA stability, when compared with a non-transmitted haplotype (1544C-1651A), suggesting that the CRTH2 gene on Chr. 11q is a strong candidate gene for asthma.

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