Exon selection in α-tropomyosin mRNA is regulated by the antagonistic action of RBM4 and PTB

Jung Chun Lin, Woan Yuh Tarn

Research output: Contribution to journalArticle

55 Citations (Scopus)

Abstract

RNA-binding motif protein 4 (RBM4) has been implicated in the regulation of precursor mRNA splicing. Using differential display analysis, we identified mRNAs that associate with RBM4-containing messenger RNPs in vivo. Among these mRNAs, α-tropomyosin (α-TM) is known to exhibit a muscle cell type-specific splicing pattern. The level of the skeletal muscle-specific α-TM mRNA isoform partially correlated with that of RBM4 in human tissues examined and could be modulated by ectopic overexpression or suppression of RBM4. These results indicated that RBM4 directly influences the expression of the skeletal muscle-specific α-TM isoform. Using minigenes, we demonstrated that RBM4 can activate the selection of skeletal muscle-specific exons, possibly via binding to intronic pyrimidine-rich elements. By contrast, the splicing regulator polypyrimidine tract binding protein (PTB) excluded these exons; moreover, RBM4 antagonized this PTB-mediated exon exclusion likely by competing with PTB for binding to a CU-rich element. This study suggests a possible mechanism underlying the regulated alternative splicing of α-TM by the antagonistic splicing regulators RBM4 and PTB.

Original languageEnglish
Pages (from-to)10111-10121
Number of pages11
JournalMolecular and Cellular Biology
Volume25
Issue number22
DOIs
Publication statusPublished - Nov 2005
Externally publishedYes

Fingerprint

Polypyrimidine Tract-Binding Protein
Tropomyosin
RNA-Binding Proteins
Exons
Messenger RNA
Skeletal Muscle
RNA Isoforms
RNA Precursors
Alternative Splicing
RNA-Binding Motifs
Protein Binding
Muscle Cells
Protein Isoforms

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics
  • Cell Biology

Cite this

Exon selection in α-tropomyosin mRNA is regulated by the antagonistic action of RBM4 and PTB. / Lin, Jung Chun; Tarn, Woan Yuh.

In: Molecular and Cellular Biology, Vol. 25, No. 22, 11.2005, p. 10111-10121.

Research output: Contribution to journalArticle

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