Diffusion tensor imaging with cerebrospinal fluid suppression and signal-to-noise preservation using acquisition combining fluid-attenuated inversion recovery and conventional imaging: Comparison of fiber tracking

Yen Wei Cheng, Hsiao Wen Chung, Cheng Yu Chen, Ming Chung Chou

Research output: Contribution to journalArticle

11 Citations (Scopus)

Abstract

Objective: To propose an acquisition scheme suitable for fiber tractography without cerebrospinal fluid contamination while retaining high signal-to-noise ratio. Materials and methods: Diffusion tensor imaging (DTI) data at b = 0 and 1000 s/mm2 were acquired using conventional spin-echo echo-planar imaging (TR/TE = 4000/69, NEX = 4, scan time 2:14) plus one additional fluid-attenuated inversion recovery (FLAIR) b = 0 set obtained at TI = 2200, TR = 6000, and NEX = 6 (scan time 1:36). The FLAIR images were intensity-adjusted to match the conventional b = 0 images according to the white matter signals. Five healthy adults were scanned, with tractography performed from conventional b = 1000 and FLAIR b = 0 images using the EZ-tracing algorithm. Total traced volumes were statistically compared among conventional DTI, FLAIR DTI, and the "combined DTI" methods at three different slice thicknesses. The fiber consistency index was derived for five repeated scans to assess possible false tracts. Results: Whole-brain traced volumes from FLAIR DTI and combined DTI were 9.7% (p <0.001) and 17.0% (p <0.0001) greater than from conventional DTI, respectively (paired Student t-test). Fiber consistency was similar for all three acquisition techniques (p > 0.2), suggesting insignificant difference in false tracking. Compared with conventional DTI, the increase in total traced volume for FLAIR DTI diminished with decreasing slice thickness, whereas the tractography advantage for combined DTI became increasingly prominent at thinner slices. Conclusions: The combined DTI technique is capable of improving tractography with higher signal-to-noise ratio at shorter scan time than FLAIR DTI. Its superiority at thin-slice acquisitions makes it particularly suitable for high-resolution clinical applications.

Original languageEnglish
Pages (from-to)113-117
Number of pages5
JournalEuropean Journal of Radiology
Volume79
Issue number1
DOIs
Publication statusPublished - Jul 2011
Externally publishedYes

Fingerprint

Diffusion Tensor Imaging
Cerebrospinal Fluid
Noise
Signal-To-Noise Ratio
Echo-Planar Imaging

Keywords

  • Cerebrospinal fluid
  • Diffusion tensor imaging
  • Fiber tractography
  • Fluid-attenuated inversion recovery
  • Partial volume effects

ASJC Scopus subject areas

  • Radiology Nuclear Medicine and imaging

Cite this

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title = "Diffusion tensor imaging with cerebrospinal fluid suppression and signal-to-noise preservation using acquisition combining fluid-attenuated inversion recovery and conventional imaging: Comparison of fiber tracking",
abstract = "Objective: To propose an acquisition scheme suitable for fiber tractography without cerebrospinal fluid contamination while retaining high signal-to-noise ratio. Materials and methods: Diffusion tensor imaging (DTI) data at b = 0 and 1000 s/mm2 were acquired using conventional spin-echo echo-planar imaging (TR/TE = 4000/69, NEX = 4, scan time 2:14) plus one additional fluid-attenuated inversion recovery (FLAIR) b = 0 set obtained at TI = 2200, TR = 6000, and NEX = 6 (scan time 1:36). The FLAIR images were intensity-adjusted to match the conventional b = 0 images according to the white matter signals. Five healthy adults were scanned, with tractography performed from conventional b = 1000 and FLAIR b = 0 images using the EZ-tracing algorithm. Total traced volumes were statistically compared among conventional DTI, FLAIR DTI, and the {"}combined DTI{"} methods at three different slice thicknesses. The fiber consistency index was derived for five repeated scans to assess possible false tracts. Results: Whole-brain traced volumes from FLAIR DTI and combined DTI were 9.7{\%} (p <0.001) and 17.0{\%} (p <0.0001) greater than from conventional DTI, respectively (paired Student t-test). Fiber consistency was similar for all three acquisition techniques (p > 0.2), suggesting insignificant difference in false tracking. Compared with conventional DTI, the increase in total traced volume for FLAIR DTI diminished with decreasing slice thickness, whereas the tractography advantage for combined DTI became increasingly prominent at thinner slices. Conclusions: The combined DTI technique is capable of improving tractography with higher signal-to-noise ratio at shorter scan time than FLAIR DTI. Its superiority at thin-slice acquisitions makes it particularly suitable for high-resolution clinical applications.",
keywords = "Cerebrospinal fluid, Diffusion tensor imaging, Fiber tractography, Fluid-attenuated inversion recovery, Partial volume effects",
author = "Cheng, {Yen Wei} and Chung, {Hsiao Wen} and Chen, {Cheng Yu} and Chou, {Ming Chung}",
year = "2011",
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volume = "79",
pages = "113--117",
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TY - JOUR

T1 - Diffusion tensor imaging with cerebrospinal fluid suppression and signal-to-noise preservation using acquisition combining fluid-attenuated inversion recovery and conventional imaging

T2 - Comparison of fiber tracking

AU - Cheng, Yen Wei

AU - Chung, Hsiao Wen

AU - Chen, Cheng Yu

AU - Chou, Ming Chung

PY - 2011/7

Y1 - 2011/7

N2 - Objective: To propose an acquisition scheme suitable for fiber tractography without cerebrospinal fluid contamination while retaining high signal-to-noise ratio. Materials and methods: Diffusion tensor imaging (DTI) data at b = 0 and 1000 s/mm2 were acquired using conventional spin-echo echo-planar imaging (TR/TE = 4000/69, NEX = 4, scan time 2:14) plus one additional fluid-attenuated inversion recovery (FLAIR) b = 0 set obtained at TI = 2200, TR = 6000, and NEX = 6 (scan time 1:36). The FLAIR images were intensity-adjusted to match the conventional b = 0 images according to the white matter signals. Five healthy adults were scanned, with tractography performed from conventional b = 1000 and FLAIR b = 0 images using the EZ-tracing algorithm. Total traced volumes were statistically compared among conventional DTI, FLAIR DTI, and the "combined DTI" methods at three different slice thicknesses. The fiber consistency index was derived for five repeated scans to assess possible false tracts. Results: Whole-brain traced volumes from FLAIR DTI and combined DTI were 9.7% (p <0.001) and 17.0% (p <0.0001) greater than from conventional DTI, respectively (paired Student t-test). Fiber consistency was similar for all three acquisition techniques (p > 0.2), suggesting insignificant difference in false tracking. Compared with conventional DTI, the increase in total traced volume for FLAIR DTI diminished with decreasing slice thickness, whereas the tractography advantage for combined DTI became increasingly prominent at thinner slices. Conclusions: The combined DTI technique is capable of improving tractography with higher signal-to-noise ratio at shorter scan time than FLAIR DTI. Its superiority at thin-slice acquisitions makes it particularly suitable for high-resolution clinical applications.

AB - Objective: To propose an acquisition scheme suitable for fiber tractography without cerebrospinal fluid contamination while retaining high signal-to-noise ratio. Materials and methods: Diffusion tensor imaging (DTI) data at b = 0 and 1000 s/mm2 were acquired using conventional spin-echo echo-planar imaging (TR/TE = 4000/69, NEX = 4, scan time 2:14) plus one additional fluid-attenuated inversion recovery (FLAIR) b = 0 set obtained at TI = 2200, TR = 6000, and NEX = 6 (scan time 1:36). The FLAIR images were intensity-adjusted to match the conventional b = 0 images according to the white matter signals. Five healthy adults were scanned, with tractography performed from conventional b = 1000 and FLAIR b = 0 images using the EZ-tracing algorithm. Total traced volumes were statistically compared among conventional DTI, FLAIR DTI, and the "combined DTI" methods at three different slice thicknesses. The fiber consistency index was derived for five repeated scans to assess possible false tracts. Results: Whole-brain traced volumes from FLAIR DTI and combined DTI were 9.7% (p <0.001) and 17.0% (p <0.0001) greater than from conventional DTI, respectively (paired Student t-test). Fiber consistency was similar for all three acquisition techniques (p > 0.2), suggesting insignificant difference in false tracking. Compared with conventional DTI, the increase in total traced volume for FLAIR DTI diminished with decreasing slice thickness, whereas the tractography advantage for combined DTI became increasingly prominent at thinner slices. Conclusions: The combined DTI technique is capable of improving tractography with higher signal-to-noise ratio at shorter scan time than FLAIR DTI. Its superiority at thin-slice acquisitions makes it particularly suitable for high-resolution clinical applications.

KW - Cerebrospinal fluid

KW - Diffusion tensor imaging

KW - Fiber tractography

KW - Fluid-attenuated inversion recovery

KW - Partial volume effects

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