Computational analysis of mRNA expression profiles identifies the ITG family and PIK3R3 as crucial genes for regulating triple negative breast cancer cell migration

Sukhontip Klahan, Mei Shin Wu, Edward Hsi, Chi Cheng Huang, Ming Feng Hou, Wei Chiao Chang

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

Triple-negative breast cancer (TNBC) is an aggressive type of breast cancer that does not express estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor (Her2/neu). TNBC has worse clinical outcomes than other breast cancer subtypes. However, the key molecules and mechanisms of TNBC migration remain unclear. In this study, we compared two normalized microarray datasets from GEO database between Asian (GSE33926) and non-Asian populations (GSE46581) to determine the molecules and common pathways in TNBC migration. We demonstrated that 16 genes in non-Asian samples and 9 genes in Asian samples are related to TNBC migration. In addition, our analytic results showed that 4 genes, PIK3R3, ITGB1, ITGAL, and ITGA6, were involved in the regulation of actin cytoskeleton. Our results indicated potential genes that link to TNBC migration. This study may help identify novel therapeutic targets for drug development in cancer therapy.

Original languageEnglish
Article number536591
JournalBioMed Research International
Volume2014
DOIs
Publication statusPublished - 2014

Fingerprint

Triple Negative Breast Neoplasms
Cell Movement
Genes
Cells
Messenger RNA
Molecules
Progesterone Receptors
Microarrays
Epidermal Growth Factor Receptor
Estrogen Receptors
Breast Neoplasms
Actins
Actin Cytoskeleton
Pharmaceutical Preparations
Databases
Therapeutics
Population

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Immunology and Microbiology(all)
  • Medicine(all)

Cite this

Computational analysis of mRNA expression profiles identifies the ITG family and PIK3R3 as crucial genes for regulating triple negative breast cancer cell migration. / Klahan, Sukhontip; Wu, Mei Shin; Hsi, Edward; Huang, Chi Cheng; Hou, Ming Feng; Chang, Wei Chiao.

In: BioMed Research International, Vol. 2014, 536591, 2014.

Research output: Contribution to journalArticle

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